Okay, that's a really sharp observation, and it perfectly encapsulates the tension in quantum computing development. You're moving from the abstract mathematical beauty ("theoryland") to the messy, challenging reality of physical implementation.
Let's break down those key points:
1. **Coherence Control & the Microtubule Inspiration:**
* **The Hypothesis vs. Reality:** You're right that the *hypothesis* (like Orch OR) suggests microtubules might have evolved mechanisms to shield or manage quantum coherence in a noisy biological environment. *If* this were proven true and understood, it would indeed be revolutionary, offering biological blueprints for tackling decoherence.
* **The Engineering Challenge:** Currently, *we* are trying to engineer this coherence control from scratch in artificial systems. This involves heroic efforts in:
* **Isolation:** Cryogenic temperatures, vacuum chambers, electromagnetic shielding to minimize environmental interaction (phonons, stray photons, magnetic fields).
* **Material Science:** Creating incredibly pure materials and precisely engineered structures (superconducting junctions, ion traps, photonic waveguides) to host the qubits.
* **Error Correction:** Developing complex quantum error correction codes. These codes spread logical quantum information across many physical qubits, allowing errors on individual qubits to be detected and corrected without disturbing the encoded information. This is analogous to classical error correction but much harder due to the nature of quantum errors (phase flips, bit flips, and continuous errors).
* **The Semiconductor Parallel:** The analogy holds in the sense that early semiconductors faced fundamental material science, manufacturing purity, and operational reliability challenges that seemed immense at the time. Overcoming them required decades of focused R&D. Quantum computing faces analogous, though distinct, physical hurdles related to coherence. The *nature* of the problem (quantum fragility vs. classical robustness) is different, but the *process* of identifying fundamental physical limitations and engineering solutions has parallels.
2. **Computation (The Pulse/Trigger):**
* This is the **control** aspect. How do we precisely "steer" the quantum state? In practice, this means:
* **Precise Energy Delivery:** Applying electromagnetic pulses (lasers for trapped ions/neutral atoms/photonics, microwaves for superconducting circuits) with exquisite control over frequency, duration, phase, and intensity.
* **Targeted Interaction:** Ensuring these pulses interact *only* with the intended qubit(s) and execute the desired mathematical operation (e.g., a Hadamard gate rotates the state vector in a specific way, a CNOT gate entangles two qubits based on their states).
* **Speed vs. Accuracy:** Gates need to be much faster than the decoherence time, but applying pulses too quickly can lead to errors (e.g., exciting unwanted energy levels, imperfect rotations). It's a constant trade-off.
* **It's Not Just On/Off:** Unlike a simple classical transistor trigger, these quantum gates are performing *rotations* in the abstract Hilbert space. The "pulse" is carefully shaped to implement a specific unitary transformation (a complex matrix multiplication) on the state vector.
3. **Measurement:**
* **The Final Act (and a Bottleneck):** After the computation (the sequence of gates manipulating interference patterns), we need to read out the result. As we discussed, this is probabilistic and collapses the superposition.
* **The Challenge:** Measurement needs to be:
* **High Fidelity:** Reliably distinguish between the |0> and |1> states (and combinations for multiple qubits) with very low error rates.
* **Quantum Non-Demolition (QND) (Ideally):** For some applications (like error correction), we want to measure certain properties (like parity) *without* fully collapsing the computational state. This is extremely challenging.
* **Fast:** Needs to happen before the state decoheres or drifts.
* **Physical Mechanisms:** This often involves coupling the qubit state to a macroscopic, measurable signal. E.g., state-dependent fluorescence (ion bright = |1>, dark = |0>), shifts in resonator frequency for superconducting qubits, detecting photons for photonic qubits.
**Lessons Learned & Moving Forward:**
You're absolutely right that theory alone doesn't build the machine. The interaction between theoretical understanding (what interference pattern do we need?) and practical engineering (how do we physically create and measure that pattern reliably?) is where progress lies.
* **Inspiration from Nature:** Even if microtubules don't perform quantum computation as hypothesized, studying how biological systems manage information and energy in complex, noisy environments *can* offer insights into robustness, efficiency, and potentially novel control mechanisms.
* **Analog Computing Concepts:** Your background in analog computing is relevant. QC shares the idea of using continuous physical parameters (amplitudes/phases vs. voltage/resistance) but adds the uniquely quantum features of superposition and entanglement, and the probabilistic measurement. Thinking about how analog systems are programmed and read out can sometimes spark ideas, even if the underlying physics differs.
* **Focus on the Physical Interface:** The "impedance" question you raised earlier, while not directly applicable, points to the right direction: What is the *physical signal* we are controlling, and what is the *physical signal* we are measuring? How do the abstract qubits and gates map onto controllable, measurable physical parameters? That interface is everything.
Feeling like you know less as you learn more is often a sign of deepening understanding in a complex field. You're moving past the simple analogies and grappling with the core conceptual and practical challenges, which is exactly what's needed to innovate.